K e y w o r d s l i n e a r systems of equations, lu decomposition, partial pivoting, parallel processing. Parallel implementation discussion general theory partial pivoting sequential algorithm methods for solving ax b 1 direct methods obtain the exact solution in real arithmetic in. Efficient parallel algorithm for dense matrix lu decomposition with. The authors report that the parallel symbolic factorization takes relatively little time compared to the other steps of the solver. Cs 770g parallel algorithms in scientific computing. Ieee transactions on parallel and distributed systems 8. We describe the rightlooking variant of the lu decomposition algorithm in the task parallel approach, and provide an ef. On the parallelization of blocked lu factorization algorithms. However, their parallel formulations have not been well understood and they have been considered to be unsuitable for distributed memory parallel computers. We prove a novel lower bound on the latency cost of 2. Recursion leads to automatic variable blocking for dense linearalgebra algorithms, ibm journal of research and development 41 6. Now we want to see how this factorization allows us to solve linear systems and why in many cases it is the preferred algorithm compared with ge. We present parallel and sequential dense qr factorization algorithms that are both optimal up to polylogarithmic factors in the amount of communication they perform, and just as stable as householder qr. Parallel matrix factorization for recommender systems.
In this paper, we are concerned with a number of different parallel algorithms for the lu decomposition of a square matrix a that is its decomposition into a product of a lower triangular matrix l and an upper triangular matrix u we consider methods using both a unit lower triangular matrix l and a general upper triangular matrix u, and a unit upper triangular matrix and a. We employ a multiple iterative update algorithm like em algorithm, see algorithm1, because dvkwtf is a nonconvex function although it is a convex function when. Heterogeneous parallel lu factorization algorithm dsign. All nonzeros in the incomplete factors can be computed. Communicationoptimal parallel and sequential qr and lu factorizations james demmel, laura grigori, mark hoemmen, and julien langou abstract. Recursive factorization of matrices recursive factorization rf of matrices is a divide and conquer technique used in many.
We demonstrate that with the task scheduling features provided by. Parallel incompletelu and cholesky factorization in the. Trsm algorithm for parallel execution on p processors with unbounded memory. Speedup factors are given for the parallel algorithms. This paper presents a new negrained parallel algorithm for computing an incomplete lu factorization. Pdf research on parallel lu decomposition method and its. Realistic performance prediction tool for the parallel. However, lu factorization cannot be guaranteed to be stable. Scalable parallel sparse lu factorization methods on shared. In the next section, we will introduce the parallel lu factorization algorithm based on this columnlevel dependency.
Nonnegative matrix factorization nmf decomposes a highdimensional nonnegative matrix into the product of two reduced dimensional nonnegative matrices. Scalable parallel sparse lu factorization methods on shared memory multiprocessors. This paper mainly designed a new method of using the parallel lu decomposition algorithm for solving largescale dense linear equations on the basis of the strategy of divide and rule, and. To understand the parallel blocked factorization algorithms the corresponding sequential.
Matrix factorization, when the matrix has missing values, has become one of the leading techniques for recommender systems. Multithreading and onesided communication in parallel lu. The basic algorithm proceeds row by row, attempting to eliminate entries below the. The lu factorization is the cheapest factorization algorithm. This paper presents algorithms for the cholesky, lu and qr factorization where the operations can be represented as a sequence of small tasks that operate on square blocks of data. The paper is based on the authors master thesis 1, defended at sarajevo school of science and technology in 2012. The algorithm is driven by the two dimensional 2d distribution of the data designed for the numerical factorization step and the elimination tree of a.
Unlike existing parallel algorithms, the new algorithm does not depend on reordering the matrix. A parallel processing algorithms for solving factorization and knapsack problems g. Procedia computer science 9 2012 67 a 75 18770509 a 2012 published by elsevier ltd. This algorithm can be combined with sameh and brents siam j. Thus, the data distribution is chosen mainly by considering thematrix update. Mixedmode scheduling for parallel lu factorization of sparse. Communicationoptimal parallel and sequential qr and lu. Pdf research on parallel lu decomposition method and it.
Parallel graph coloring with applications to the incomplete. Parallel numerical algorithms chapter 6 lu factorization. Key concepts for parallel outofcore lu factorization. A parallel algorithm for dense matrix lu decomposition with pivoting on hypercubes is presented. Numerical tests show that very few sweeps are needed to construct a factorization that is an e ective preconditioner. Parallel matrix factorization for recommender systems 5 fig. The lu factorization 8 of large sparse matrices is a computation greedy process and plays such an important role in many scientific applications that its efficient implementation has long been the focus of many research efforts. Solving the following system of n linear equations is the core computation of many engineering and scientific applications ax b 1. Chapter 1 an improved algorithm for parallel sparse lu. Gpuaccelerated parallel sparse lu factorization method. Ippl provides a parallel particle layer to handle simulations.
Thisnumbershouldbe determinedby the inspectionof the. Parallel lu factorization multithreaded solvers circuit thatsimulation target solvers on intel xeon phi a b s t r a c t simulation in circuit tools,simulation as spicesuch and depend on xyce, scal able and robust sparse lu factorizations for e. A class of parallel tiled linear algebra algorithms for. Using n processors, the presented algorithm can finish lu decomposition of an n x n. This paper describes a few algorithms for obtaining good quality hierarchical graph decompositions and discusses the parallel implementation of the factorization procedure. Efficient sparse lu factorization with partial pivoting on. This paper presents a new finegrained parallel algorithm for computing an incom plete lu factorization. Unlike existing parallel algorithms, the new algorithm does. We shall analyze in more detail the parallel solver obtained by using the second factoriza tion, which we shall call parallel qr factorization method, but a similar approach can be repeated for the former.
Communicationoptimal parallel and sequential qr and lu factorizations james demmel, laura grigori, mark hoemmen, and julien langou october 29, 2019 abstract we present parallel and sequential dense qr factorization algorithms that are both optimal up to polylogarithmic factors in the amount of. Transition from sequential algorithms that rely on parallel blas to parallel algorithms. We present algorithms for the symbolic and numerical factorization phases in the direct solution of sparse unsymmetric systems of linear equations. The parallel computation of incomplete lu ilu factorizations has been a subject of much interest since the 1980s.
Partial pivoting although we utilize mc64 algorithm in the preprocessing step to enhance numeric stability, it is still possible to generate small pivots on the diagonal during the numeric. Example a fundamental problem is given if we encounter a zero pivot as in a 1 1 1 2 2 5 4 6 8. Cohen nvidia, 2701 san tomas expressway, santa clara, ca 95050 abstract in this technical report we study di erent parallel graph coloring algorithms and their application to the incomplete lu factorization. Research on parallel lu decomposition method and its. This algorithm is implemented in terms of the blacs lo, pblas 3, and scalapack 2 routines. Parallel lu factorization on gpu cluster sciencedirect.
To define a parallel algorithm for solving a sys tem of linear equations it is necessary to define the computational model on which the implementation is based. Precomputed subblocks currently being operated on subblocks. Of course, there will always be examples of parallel algorithms that were not derived from serial algorithms. Keywords, parallel algorithms, distributedmemory multiprocessors, lufactorization, gaussian elimination, hypercube amsmossubject classifications. Cong fu, xiangmin jiao, and tao yang, member, ieee. They isolate problems inherent in sequential blocked algorithms and provide approaches to overcome them on distributed memory architectures.
The algorithm was implemented and tested on a cray x. Parallel lu factorization of sparse matrices on fpgabased. Remember on paper, these methods are the same but computationally they can be di erent. Comparison between als, dsgd, and hogwild on the movielens10m dataset with k 40 on a 8core machine s1 and s2 stand for di erent initial learning rates. In particular, we show that incomplete lu factorization based on graph coloring can achieve a speedup of almost 8 on the gpu over the reference mkl implementation on the cpu. A new scheduling algorithm for parallel sparse lu factorization with static pivoting. Parallel lufactorization algorithms for dense matrices.
Realistic performance prediction tool for the parallel block lu factorization algorithm 169 metric. Parallel algorithm may represent an entirely different algorithm than the one used serially. Lu decomposition method with the pipelining technique. Abstract the authors present the parallelization of blocked algorithms for lu factorization. Sequential and parallel algorithms for cholesky factorization. Thesecond algorithmwewill describe is lufactorization withrowpivotingwhenthe coefficient matrix is distributed among the processors by columns, which we will refer to as csrp. The lud benchmark runs lu factorization for a predefined wellconditioned matrix.
Pdf parallel lu factorization of blockdiagonalbordered. The fact that these bandwidth costs can be obtained for the lu decomposition. Abstract research is being performed to examine the applicability of parallel direct blockdiagonalbordered sparse matrix solvers for irregular sparse matrix problems derived from the electrical power systems community. Extra memory allows parallel matrix multiplication to be done with asymptotically less communication than cannons algorithm and be faster in practice. Among its features are matrix redistribution at regular. Abstracta new parallel algorithm for the lu factorization of a given dense matrix a is described. Key ingredients of a symbolic factorization as a key step in ef. On the parallelization of blocked lu factorization. Dhillon department of computer science, the university of texas at austin, austin, tx 78712, usa abstract. On the parallelization of blocked lu factorization algorithms ondistributed memory architectures conference paper pdf available december 1992 with 22 reads how we measure reads. In 12 we present our results of parallel lu factorization for sparse matrices permuted into the bdb.
Fast parallel randomized algorithm for nonnegative matrix. Numerical experiments are reported to illustrate the scalability of the algorithm and its e. Section 7 presents some preliminary performance results on the intel paragon. Parallel incompletelu and cholesky factorization in the preconditioned iterative methods on the gpu maxim naumov nvidia, 2701 san tomas expressway, santa clara, ca 95050 abstract a novel algorithm for computing the incompletelu and cholesky factorization with 0 llin on a graphics processing unit gpu is proposed. The parallel tiled wz factorization algorithm for multicore. The parallel computation of incomplete lu ilu factoriza.
In this paper we present a new parallel algorithm for the lu decomposition of a general sparse matrix. A heterogeneous parallel lu factorization algorithm based on a basic column block uniform allocation strategy rongtengwu 1,2 andxiaohongxie 3. Pdf implementing parallel lu factorization with pipelining on a. We have modified a classical symbolic factorization algorithm for unsymmetric matrices to inexpensively compute minimal elimination structures. A parallel processing algorithms for solving factorization.
Li lawrence berkeley national laboratory, ms 50f1650 one cyclotron road, berkeley, ca 94720, usa. Extra memory allows parallel matrix multiplication to be. The algorithm decomposes the matrix a in a lower triangular matrix l and. A scalable task parallelism approach for lu decomposition. Introduction to lu factorization this section presents an overview of the lu factorization problem 4, 28, 29, 30. A complete parallel, outofcore lu factorization routine is described in section 6. This paper describes four approaches for implementing lu factorization ona distributedmemory multiprocessor, specifically a hypercube. Pdf this paper mainly designed a new method of using the parallel lu decomposition algorithm for solving largescale dense linear equations on the. Parallel bordereddiagonalblock sparse lu factorization 2. However, conventional nmf neither qualifies largescale datasets as it maintains all data in memory nor preserves the geometrical structure of data which is needed in some practical tasks.
Werestrict our attention to twocommonlyused storage schemes storage. The main objective of graph coloring is to assign a color to every. So, could you, please, recommend me some parallel algorithms for ludecomposition which are really easy to understand and implement. Parallelizing lu decomposition university at buffalo. All nonzeros in the incomplete factors can be computed in parallel and asynchronously, using one or more sweeps that iteratively improve the accuracy of the factorization. A study on shared memory mimd machines using blocked based algorithms for lu factorization can be found in 4. So, could you, please, recommend me some parallel algorithms for lu decomposition which are really easy to understand and implement. In kaira the programmer writes the parallel part as the diagram similar to petri nets. Algorithms for the qr, lu and cholesky factorizations based on recursion have been developed in the past 16,23 in order to increase the amount of computations performed in level3 blas operations inside the panel. Sarkar tasks and dependency graphs the first step in developing a parallel algorithm is to decompose the problem into tasks that are candidates for parallel execution task indivisible sequential unit of computation a decomposition can be illustrated in the form of a directed graph with nodes corresponding to tasks and edges. Factorization algorithms based on threshold incomplete lu factorization have been found to be quite effective in preconditioning iterative system solvers. Computer science and mathematics division, oak ridge national laboratory, oak ridge, tn 37831. Factorization algorithm an overview sciencedirect topics.
Parallel nonnegative matrix factorization with manifold. Abstracta sparse lu factorization based on gaussian elimination with partial pivoting gepp is important to many scientific applications, but it is still an open problem to develop a high performance gepp code on distributed memory machines. Parallel quadrant interlocking factorization on hypercube computers, parallel computing 15. Since not every matrix is suitable for parallel algorithm, a predictive method is proposed to decide whether a matrix should use parallel or sequential algorithm. Pdf on the parallelization of blocked lu factorization. Abstract this paper describes our progress in developing software for performing parallel lu factorization of a. An algorithm for computing in parallel the general lu factorization of a matrix is presented. Parallel graph coloring with applications to the incomplete lu factorization on the gpu m. Blocked algorithms lu factorization leftlooking lu rightlooking lu crout lu variations in algorithm are due to the order in which submatrix operations are performed. The algorithm is divided into mapping and scheduling phases, using the symmetric pruned graphs of l and. To the best of our knowledge, this lu algorithm is the. Abstract lu decomposition is intensively used in various scientific and engineering compu tations.
A heterogeneous parallel lu factorization algorithm based. Parallel algorithms for lu decomposition on a shared memory. Parallel algorithms for lu decomposition on a shared. Key concepts for parallel outofcore lu factorization the netlib.
Our goal is to determine which of these four algorithms admits the most efficient parallel implementation. As special cases, one obtains the doolittle, crout and cholesky methods. We primarily focus on parallel formulations our goal today is to primarily discuss how to develop such parallel formulations. Slight advantages to crouts algorithm hybrid of the first two. May 27, 2005 several serial and parallel algorithms for computing the lu factorization of a dense matrix are investigated. Finally, we mention that the incompletelu and cholesky factorizations.
Both sequential and parallel algorithms are explored. Introduction to supercomputing mcs 572 parallel gaussian elimination l. This paper firstly describes the basic content of lu decomposition algorithm and the parallel algorithm, by analyzing the inherent parallelism of lu decomposition algorithm, researched and designed a parallel lu decomposition algorithm on the basis of the strategy of divide and rule. The algorithm that constructs the directed acyclic graph that allows us to explore the parallelism in both the numerical factorization and solve phases will be explained in more details in the next section. A parallel algorithm for the general lu factorization. The parallel qr factorization algorithm for tridiagonal. Lu factorization we have seen that the process of ge essentially factors a matrix a into lu. This paper proposes a parallel lu factorization with partial pivoting algorithm on sharedmemory computers with multicore cpus, to accelerate circuit simulation. Parallel incomplete lu and cholesky factorization in the preconditioned iterative methods on the gpu maxim naumov nvidia, 2701 san tomas expressway, santa clara, ca 95050 abstract a novel algorithm for computing the incomplete lu and cholesky factorization with 0 llin on a graphics processing unit gpu is proposed. There is a big difference in performance between the opencl version blocked lu. Numerical experiments and programming considerations to reduce bank conflicts on the cray xmp4 parallel computer are presented.
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